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Mononuclear Non-heme Iron Dependent Enzymes

  • 1st Edition, Volume 703 - September 10, 2024
  • Latest edition
  • Editors: Anna Maria Pyle, Jennifer Bridwell-Rabb, David Christianson
  • Language: English

Mononuclear Non-heme Iron Dependent Enzymes, Volume 703 focuses on methods for studying, characterizing, and leveraging the chemistry of mononuclear non-heme iron dependent enzyme… Read more

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Description

Mononuclear Non-heme Iron Dependent Enzymes, Volume 703 focuses on methods for studying, characterizing, and leveraging the chemistry of mononuclear non-heme iron dependent enzymes. Chapters in this new release include Photoreduction for Rieske oxygenase chemistry, Insights into the Mechanisms of Rieske Oxygenases from Studying the Unproductive Activation of Dioxygen, Non-heme iron and 2-oxoglutarate enzymes catalyze cyclopropane and azacyclopropane formations, Obtaining precise metrics of substrate positioning in Fe(II)/2OG dependent enzymes using Hyperfine Sublevel Correlation Spectroscopy, Xe-pressurization studies for revealing substrate-entrance tunnels, and much more.

Additional chapters cover A tale of two dehydrogenases involved in NADH recycling, Rieske oxygenases and/or their partner reductase proteins, Expression, assay and inhibition of 9-cis-epoxycarotenoid dioxygenase (NCED) from Solanum lycopersicum and Zea mays, Biocatalysis and non-heme iron enzymes, In vitro analysis of the three-component Rieske oxygenase cumene dioxygenase from Pseudomonas fluorescens IP01, Structure and function of carbazole 1,9a-dioxygenase, Characterization of a Mononuclear Nonheme Iron-dependent Mono-oxygenase OzmD in Oxazinomycin Biosynthesis, and much more.

Key features

  • Provides detailed articles regarding how to study the structures and mechanisms of mononuclear non-heme iron dependent enzymes
  • Guides readers on how to use partner proteins in non-heme iron enzyme catalysis
  • Includes strategies to employ mononuclear non-heme iron enzymes in biocatalytic applications

Readership

Chemists who study the remarkable transformations that are facilitated by metalloproteins. Scientists who are interested in purifying, crystallizing, mechanistically studying the chemistry of mononuclear non-heme iron enzymes, and/or leveraging the chemistry of these enzymes for biocatalytic endeavors

Table of contents

1. Photoreduction for Rieske oxygenase chemistry
Pinghua Liu

2. Insights into the Mechanisms of Rieske Oxygenases from Studying the Unproductive Activation of Dioxygen
Thomas B. Hofstetter, Charlotte E. Bopp and Nora M. Bernet

3. Non-heme iron and 2-oxoglutarate enzymes catalyze cyclopropane and azacyclopropane formations
Wei-chen Chang

4. Obtaining precise metrics of substrate positioning in Fe(II)/2OG dependent enzymes using Hyperfine Sublevel Correlation Spectroscopy
Alexey Silakov

5. Xe-pressurization studies for revealing substrate-entrance tunnels
Jennifer D. Bridwell-Rabb

6. A tale of two dehydrogenases involved in NADH recycling
Jennifer D. Bridwell-Rabb

7. Rieske oxygenases and/or their partner reductase proteins
Pravindra Kumar

8. Expression, assay and inhibition of 9-cis-epoxycarotenoid dioxygenase (NCED) from Solanum lycopersicum and Zea mays
Timothy David Bugg

9. Biocatalysis and non-heme iron enzymes
Xiongyi Huang

10. In vitro analysis of the three-component Rieske oxygenase cumene dioxygenase from Pseudomonas fluorescens IP01
Sandy Schmidt and Niels A.W. de Kok

11. Structure and function of carbazole 1,9a-dioxygenase
Hideaki Nojiri

12. Characterization of a Mononuclear Nonheme Iron-dependent Mono-oxygenase OzmD in Oxazinomycin Biosynthesis
Hung-wen Liu

13. Spectroscopic and computational studies of a bifunctional iron- and 2-oxoglutarate dependent enzyme, AsqJ
Yisong Guo

14. Non-heme iron oxygenases for natural product biosynthesis
Ikuro Abe

15. Isonitrile Formation by a Non-Heme Iron(II)-Dependent Oxidase/Decarboxylase
Wenjun Zhang

16. Assays for the epidermal growth factor hydroxylase Asph
Christopher Joseph Schofield

17. Amino acid hydroxylases
Paul Fitzpatrick

18. Extradiol dioxygenases
Yifan Wang

19. Title to be determined
Ramaswamy Subramanian

20. Experimental and computational approaches to understanding and addressing the stability limitations of Rieske Oxygenases
Jennifer DuBois

21. Construction and Testing of Whole-Cell Non-Heme Iron Biocatalysts
Ryan Summers

22. Equilibrium dialysis to measure binding affinities of non-heme iron enzymes
Ambika Bhagi-Damodaran

23. title to be determined
Thomas C. Brunold

24. Approaches to determination of the mechanism of the Rieske monooxygenase salicylate 5-hydroxylase
John D. Lipscomb and Melanie Rogers

25. Preparation of reductases for multicomponent oxygenases
Lindsay David Eltis and Megan Wolf

26. Expression, purification, and biochemical characterization of micro- and macroalgal kainoid synthases
Shaun McKinnie

27. Title to be determined
Kabirul Islam

28. Title to be determined
Edward I. Solomon

29. title to be detrmined
Adam Offenbacher

Product details

  • Edition: 1
  • Latest edition
  • Volume: 703
  • Published: September 12, 2024
  • Language: English

About the editor

DC

David Christianson

After completing studies for the A.B., A.M., and Ph.D. degrees in chemistry at Harvard University, David W. Christianson joined the faculty of the University of Pennsylvania, where he is currently the Roy and Diana Vagelos Professor in Chemistry and Chemical Biology. At Penn, Christianson’s research focuses on the structural and chemical biology of the zinc-dependent histone deacetylases as well as enzymes of terpene biosynthesis. His research accomplishments have been recognized by several awards, including the Pfizer Award in Enzyme Chemistry and the Repligen Award in Chemistry of Biological Processes from the American Chemical Society, a Guggenheim Fellowship, and the Elizabeth S. and Richard M. Cashin Fellowship from the Radcliffe Institute for Advanced Study at Harvard University. Christianson is also a dedicated classroom teacher, and his accomplishments in this regard have been recognized by the Lindback Award for Distinguished Teaching at Penn and a Rhodes Trust Inspirational Educator Award from Oxford University. Christianson has also held visiting professorships in the Department of Biochemistry at Cambridge University and the Department of Chemistry and Chemical Biology at Harvard University. Christianson has served with Prof. Anna Pyle as Co-Editor-in-Chief of Methods in Enzymology since 2015.

Affiliations and expertise
University of Pennsylvania, USA

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