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Quantum Chemistry Methods for Oncological Drugs

  • 1st Edition - February 29, 2024
  • Latest edition
  • Author: Eudenilson L. Albuquerque
  • Language: English

Quantum Chemistry Methods for Oncological Drugs provides a comprehensive reference text for student, researchers, and academic staff across disciplines working in the field of… Read more

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Description

Quantum Chemistry Methods for Oncological Drugs provides a comprehensive reference text for student, researchers, and academic staff across disciplines working in the field of Nanobiotechnology, who need to grasp the unique inter-relationship of the physical, chemical, and biological properties of oncological drugs and their interactions. It provides a theoretical/computational framework based on quantum chemistry and addresses key questions in which detailed analysis and precise predictions are always required.

The sophisticated molecular recognition of various natural biological materials has been used in the formation of a complex network of structures potentially useful for a variety of pharmaceutical applications. They offer solutions to many of the obstacles that need to be overcome, with accuracy not feasible with the technologies usually available in materials science. Important common challenges presented in this book are aspects related to the biology of cancer using our immunological checking points, specialized proteins that act as brakes in the immune system, allowing it to recognize and attack more efficiently only the cancer cells, avoiding the destruction of healthy cells as in conventional chemotherapy and radiotherapy treatments.

This book is devoted to this burgeoning area of Nanobiotechnology for oncological drugs and will be valuable in covering the new developments that have occurred in the last decade or so. It is aimed at graduate students, faculty members and other researchers in physics, chemistry, biology, pharmacology, and medicine.

Key features

  • Comprehensive and up-to-date account of the main physical, chemical, biological, and pharmaceutical properties of oncological drugs and their interactions, using a theoretical/computational framework based on quantum chemistry
  • Focuses on an exciting and dynamic area of research, not only in the academic world but also in the Nanobiotechnology industry
  • Strong multidisciplinary content: the immediate future of pure and applied scientific research undoubtedly points to the interconnection and complementarity between different areas

Readership

Graduate students, faculty members and other researchers in physics, chemistry, biology, pharmacology, and medicine. It will be useful in providing instructional material in these areas, as a review of the field of study, and/or as a comprehensive reference. It is not primarily intended as a course textbook, but it could be used as such for graduate level courses on specialized topics in related areas

Table of contents

PART I: QUANTUM CHEMISTRY: A REVIEW
Chapter 1: From classical to quantum physics (draft ready)

1.1 Classical Physics

1.1.1 Aristotelian Science

1.1.2 Galileo’s Ideas

1.1.3 Newtonian Mechanics

1.2 Failures of Classical Physics

1.2.1 Blackbody Radiation

1.2.2 The Photoelectric Effect

1.2.3 The Compton Effect

1.3 The Old Quantum Physics

1.3.1 Wilson-Sommerfeld Quantization Rule

1.3.2 1D Simple Harmonic Oscillator

1.3.3 The Hydrogen Atom

Chapter 2: Main theoretical results

2.1 Hamilton equations

2.2 Schrödinger equation

2.3 Born-Oppenheimer approximation

2.4 Chemical bonds

2.5 Many-particle systems

Chapter 3: Computational approach

3.1 Density functional theory (DFT)

3.2 Kohn-Sham (KS) approach

3.3 Exchange-correlation (XC) functionals

3.4 Basis sets

3.5 Molecular Fractional with Conjugate Caps (MFCC) method

3.6 Conclusions

PART II: IMMUNE-ONCOLOGICAL DRUGS
Chapter 4: Cancer Immunotherapy

4.1 Introduction

4.2 The human immune system

4.3 The immune checkpoint proteins

4.4 Main immune-oncological drugs

4.5 Conclusions

Chapter 5: Immune-oncological drug Atezolizumab

5.1 Introduction

5.2 Materials and Methods

5.2.1 Crystallographic Structure

5.2.2 Quantum interaction energies

5.3 Main Results and Discussions

5.3.1 PD-1/Atezolizumab recognition surface

5.3.2 Electrostatic potential isosurfaces

5.5 Conclusions

Chapter 6: Immune-oncological drug Nivolumab

6.1 Introduction

6.2 Materials and Methods

6.2.1 Drug-Receptor Complex Data

6.2.2 Quantum interaction energies

6.3 Main Results and Discussions

6.3.1 PD-1/Nivolumab recognition surface

6.3.2 PD-1/PD-L1 recognition surface

6.4 Conclusions

Chapter 7: Immune-oncological drug Pembrolizumab

7.1 Introduction

7.2 Materials and Methods

7.2.1 X-ray crystallographic data

7.2.2 Quantum interaction energies

7.3 Main Results and Discussions

7.3.1 PD-1/Pembrolizumab recognition surface

7.3.2 Electrostatic potential isosurfaces

7.4 Conclusions

Chapter 8: Immune-oncological drug Ipilimumab

8.1 Introduction

8.2 Materials and Methods

8.2.1 PDB structure

8.2.2 Quantum interaction energies

8.3 Main Results and Discussions

8.3.1 CTLA-4/Ipilimumab recognition surface

8.3.2 Electrostatic potential isosurfaces

8.4 Conclusions

Chapter 9: Optoelectronics properties

9.1 Introduction

9.2 Materials and Methods

9.2.1 Optoelectronics formalism

9.3 Main Results and Discussions

9.3.1 Optical Absorption Spectra

9.3.2 Raman Spectra

9.5 Conclusions

PART III: TRANSVERSE ONCOLOGICAL DRUGS

Chapter 10: Introduction

10.1 Treatments

10.2 Computational quantum chemistry as a therapeutic alternative

10.3 Conclusions

Chapter 11: Oncological drugs complexed with the Human Serum Albumin (draft ready)

11.1 Introduction

11.2 Materials and Methods

11.2.1 Anticancer drugs in complex with HAS

11.2.2 Molecular structures of three isolated anticancer drugs

11.2.3 Quantum binding Interaction

11.3 Main Results and Discussions

11.3.1 Complex HSA/isolated anti-cancer drugs

11.3.2 Complex HSA/multi-drug system

11.3.3 Electrostatic potential isosurfaces

11.6 Conclusions

Chapter 12: Anti- Breast cancer oncological drugs

12.1 Introduction

12.2 Materials and Methods

12.2.1 Estrogen receptors (ERs)

12.2.2 Estrogen receptor ERα and its agonists

12.2.3 Estrogen receptor ERα and its antagonists

12.3 Main Results and Discussions

12.3.1 Selective estrogen receptor modulators (SERMs)

12.3.2 Energetic description of cilengitide bound to integrin

12.4 Conclusions

Chapter 13: Anti-Prostate cancer oncological drugs

13.1 Introduction

13.2 Materials and Methods

13.2.1 Androgen receptors (AR)

13.2.2 Chemical structures

13.2.3 Quantum interaction energies

13.3 Main Results and Discussions

13.3.1 T877A mutation in prostate cancer

13.3.2 Energetic Profiles

13.4 Conclusions

PART IV: LOOKING AHEAD
Chapter 14: The future of the oncological drugs

14.1 The cancer biology

14.2 Some open questions

14.3 Conclusions

Product details

  • Edition: 1
  • Latest edition
  • Published: February 29, 2024
  • Language: English

About the author

EA

Eudenilson L. Albuquerque

Eudenilson L. Albuquerque is Professor of Physics and Biophysics, at the Department of Biophysics, UFRN, Brazil, where he served as Dean for Research and Graduate Studies (1987-1991). He has previously co-authored the books Polariton in Periodic and Quasiperiodic Structures (Elsevier, 2004) and Quantum Chemistry Simulation of Biological Molecules (Cambridge University Press, 2021).
Affiliations and expertise
Universidade Federal do Rio Grande do Norte (UFRN), Natal-RN, Brazil

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